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Few genes have made the headlines as much as FOXP2. The first gene associated with language disorders, it was later implicated in the evolution of human speech. Girls make more of the FOXP2 protein, which may help explain their precociousness in learning to talk. Now, neuroscientists have figured out how one of its molecular partners helps Foxp2 exert its effects.

The findings may eventually lead to new therapies for inherited speech disorders, says Richard Huganir, the neurobiologist at Johns Hopkins University School of Medicine in Baltimore, Maryland, who led the work. Foxp2 controls the activity of a gene called Srpx2, he notes, which helps some of the brain’s nerve cells beef up their connections to other nerve cells. By establishing what SRPX2 does, researchers can look for defective copies of it in people suffering from problems talking or learning to talk.

Until 2001, scientists were not sure how genes influenced language. Then Simon Fisher, a neurogeneticist now at the Max Planck Institute for Psycholinguistics in Nijmegen, the Netherlands, and his colleagues fingered FOXP2 as the culprit in a family with several members who had trouble with pronunciation, putting words together, and understanding speech. These people cannot move their tongue and lips precisely enough to talk clearly, so even family members often can’t figure out what they are saying. It “opened a molecular window on the neural basis of speech and language,” Fisher says.

A few years later, other researchers showed that the FOXP2 gene in humans differed from the chimp version by only two bases, the “letters” that make up DNA. That small difference may have affected Foxp2 performance such that animal calls could eventually transform into the human gift of gab. In 2009, a team put the human version of the gene in mice and observed that the rodents produced more frequent and complex alarm calls, suggesting these mutations may have been involved in the evolution of more complex speech. But how Foxp2 works has largely remained a mystery.

Huganir didn’t start out trying to solve this mystery. He was testing 400 proteins to see if they helped or hindered the development of specialized junctions between nerve cells, called synapses, which allow nerve cells to communicate with one another. A single neuron can have up to 10,000 synapses, or connections to other neurons, Huganir says. Of the 10 proteins he identified, one that strongly promoted synapse formation was Srpx2, a gene other researchers had linked to epilepsy and language problems.

Huganir and his colleagues examined Srpx2 activity in isolated nerve cells, determining that it stimulated the formation of “excitatory” connections, ones where a “turn on” message was conveyed to the receiving nerve cell. Srpx2 also enhanced the number of excitatory connections in the part of the brain in developing mice that is the equivalent of the human language center, the researchers report online today in Science. Because Foxp2 regulates the activity of several genes, including Srpx2, Huganir and his team took a closer look at howFoxp2 affected this gene. When Foxp2 is around, Srpx2 makes fewer excitatory synapses, they report. It may be that the right balance of excitatory synapses and other connections may be necessary for complex vocalizations, Huganir suggests.

As a final test, the researchers looked to see how changing the activity of the Srpx2 gene affected alarm calls of baby mice. Mice pups separated from their moms call for help with squeals too high-pitched for humans to hear. When the researchers artificially inhibited Srpx2’s activity, the mice squealed less. But the pups squealed normally again when gene activity was restored, Huganir and his colleagues report.

The work “shows that Foxp2 affects synapse formation through Srpx2,” says Svante Pääbo, a paleogeneticist at the Max Planck Institute for Evolutionary Anthropology in Leipzig, Germany, who has studied Foxp2 in primates and in mice. “It is the first target gene of Foxp2 that has a clear function with respect to neuronal function.”

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